Insertion junction: CLIP2.006879_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006879
Chromosome:chromosome 1
Location:2741902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016570 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR016024//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Armadillo-type fold // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCCCTACAGGATCCTGTACGAGCACTACCCGCGGCCCAAGGAGTTCA
Internal bar code:CGTATTGGGGCCGCATCGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGTTGGGTCATCACCAT
Suggested primer 2:GACATTGTCAGGTGGGGGAG