Insertion junction: CLIP2.006879_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006879
Chromosome:chromosome 1
Location:2741916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016570 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR016024//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Armadillo-type fold // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTGGATTGCGCTGCGGTTGTGTGGCAGCGTGTGTTGTATCGCATGT
Internal bar code:TTCACAATATGTTGTGCCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACATTGTCAGGTGGGGGAG
Suggested primer 2:ATGCGTTGGGTCATCACCAT