Insertion junction: CLIP2.006881_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006881
Chromosome:chromosome 17
Location:3274073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721950 (1 of 1) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAATAGCGTTCTAACCCCGACGTGCCGGGCTGCGTGTGCTCTCTGTAA
Internal bar code:AACTGATCACACTACGCCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCATTGCCACCATAATG
Suggested primer 2:GCAACCTGGTCATGTGCAAG