Insertion junction: CLIP2.006888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006888
Chromosome:chromosome 16
Location:1930791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656100 (1 of 1) PF07444 - Ycf66 protein N-terminus (Ycf66_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGATTCCATGAGCTGCAAAGACAGAGTGACATGCTGTGTGAAATAG
Internal bar code:AGAATAGATTATAATCTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGGCATTCATCACCTT
Suggested primer 2:CGTTTGGAGGAGCTGGTCTT