Insertion junction: CLIP2.006892_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006892
Chromosome:chromosome 2
Location:7568399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393173 ELI8,ELI2,ELIP8 Early light-induced LHC-like protein; (1 of 5) PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGTACACATTGCCCGCCCTCTCCGACCTCCCACCAAGCACTGTCGCA
Internal bar code:TGTACATAGGTAATGGGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3741
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGGTTACGACGAGCGA
Suggested primer 2:CTGTCGATCACGCAGCATTG