Insertion junction: CLIP2.006895_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006895
Chromosome:chromosome 12
Location:1955499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511400 CYCR3,PPR4 PentatricoPeptide Repeat protein 4; (1 of 1) PTHR10177//PTHR24015 - CYCLINE // FAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGCAGCCAGCAGTACAGGCACACCATGGCCACGCCCGCGGTCATGG
Internal bar code:CTGGAGGCCACAGCGAATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3819
LEAP-Seq percent confirming:96.2366
LEAP-Seq n confirming:179
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:186

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTACGGTCGGATATTGG
Suggested primer 2:GTTCTCAAAGTGCTGCACCG