Insertion junction: CLIP2.006895_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006895
Chromosome:chromosome 12
Location:1955505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511400 CYCR3,PPR4 PentatricoPeptide Repeat protein 4; (1 of 1) PTHR10177//PTHR24015 - CYCLINE // FAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCGGGGCGAGAGGGGATGGCATGCGTTAGGGCTTGCACCAAGCGAAA
Internal bar code:TTATCTATCGCTGTGCTTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTCAAAGTGCTGCACCG
Suggested primer 2:TGCGTACGGTCGGATATTGG