Insertion junction: CLIP2.006898_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006898
Chromosome:chromosome 13
Location:124553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562750 CGLD38 Conserved in the Green Lineage and Diatoms; (1 of 1) PF14234 - Domain of unknown function (DUF4336) (DUF4336) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCTTTTTAAAAAAAATGTGTTAATGCCTATTGCATGTAAATAGGTGG
Internal bar code:AAAACTCTGCAGGGGTCGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1221
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGGTGATGTAGTTGGC
Suggested primer 2:GGGGATGGTGCTTTAGGCTT