Insertion junction: CLIP2.006906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006906
Chromosome:chromosome 8
Location:2445803
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g372000 BAF3,CGLD6,CGLD11 chloroplast ATPase CF1 assembly factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCACCTCCCCTTTCCTCTGCATCGCGAGCGAGTGTGGCGTTGTGGTG
Internal bar code:TAGGTTCTCGTGAATAGAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGGAGAATGGGGAGGT
Suggested primer 2:CAATCTGGAATTCAGGCGCG