Insertion junction: CLIP2.006912_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006912
Chromosome:chromosome 12
Location:6013740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534450 CGL86 forkhead-associated domain-containing protein; (1 of 1) PTHR23308//PTHR23308:SF29 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCGGGCTTCTCTGTGTTACAGTCCAGGTGCGGAACATAATGTTGCA
Internal bar code:GGACAGTTACCGGTATCTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:478
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCCGCACGGTAATTGTT
Suggested primer 2:CGTCGCGATGAGCTTTTGAG