Insertion junction: CLIP2.006918_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006918
Chromosome:chromosome 3
Location:2621493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160400 SAC1 (1 of 1) IPR001898//IPR004680//IPR006037//IPR029062 - Sodium/sulphate symporter // Citrate transporter-like domain // Regulator of K+ conductance, C-terminal // Class I glutamine amidotransferase-like; Sulfur acclimation 1 protein 3'UTR
Cre03.g160450 PF15,KATNB1,KAT2 (1 of 1) K18643 - katanin p80 WD40 repeat-containing subunit B1 (KATNB1); Katanin p80 subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGGATAGAAGTCCAAACCTGCGCAGAAGTAGCTGTAACCTCCATTG
Internal bar code:GGTTGAAAGTGTTTGTCATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCTGTGTGCTGGAGGAT
Suggested primer 2:ATAGCAGTATCGACGTGGCG