Insertion junction: CLIP2.006922_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006922
Chromosome:chromosome 1
Location:3299244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021200 CGL47 conserved protein with F-box domain; (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGCCCTGCGATTTCCAGGCCATCGCCTCGTTGCCCGCATACCGTATT
Internal bar code:ATGTTTGGTATGAGGGGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGTACGCCTGCATGTA
Suggested primer 2:AGTCACGTACAAGGCCCATG