Insertion junction: CLIP2.006928_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006928
Chromosome:chromosome 14
Location:937944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613450 CGL87 (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCCCATGGCCAGGCCCAGACCACCCACCCACAGTGCACGCTACACAC
Internal bar code:CATGTAAGTAAACGGAAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGCAGCACAAATATACG
Suggested primer 2:TCAACCCCTGTGCACAACTT