Insertion junction: CLIP2.006930_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006930
Chromosome:chromosome 16
Location:2606628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661150 CGL5 Conserved in the Green Lineage; (1 of 2) 5.2.1.14 - Beta-carotene isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTTGCACATGTTGACACACATGCCCACGCAGCCGCTGGCCTCCAGGT
Internal bar code:CTCAGATCCGAGGTTCCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTCATGCCTAAGGAGG
Suggested primer 2:GACGAGCCTGGTCAAAGGAA