Insertion junction: CLIP2.006947_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006947
Chromosome:chromosome 13
Location:298320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564050 (1 of 1) PTHR37764//PTHR37764:SF1 - FAMILY NOT NAMED // MOG1/PSBP/DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN 3'UTR
Cre13.g564100 PTK2 (1 of 57) 2.7.10.2 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase; Protein tyrosine kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTAAAACATATGCCGACGAGCACCAGAGAACTCTCTTCGCACATAAG
Internal bar code:AGTAGTAGTTATAGGGGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCCACCAACGATGACAT
Suggested primer 2:TGCATCTGACTGTGCGAACT