Insertion junction: CLIP2.006958_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006958
Chromosome:chromosome 12
Location:5348135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528800 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGTAAAGCGGTGAAGTTTAATTCATGCTCAGTAGAAGGCTGACGGA
Internal bar code:CAGTCATTAAGGTGTTTATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAACTATTACGAGGGGC
Suggested primer 2:TGTCCCCAGCCCTCATATGA