Insertion junction: CLIP2.006964_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006964
Chromosome:chromosome 1
Location:3453302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022400 (1 of 77) IPR001623 - DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCAAGAAGCGGCGATGGTGGTTGCTGCACACTCTGCCATGTACCAA
Internal bar code:CTTGTATTGATCGTCCGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGCCAAAGACAAGCTT
Suggested primer 2:TGTCTCACACGCCTCTCAAC