Insertion junction: CLIP2.006966_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006966
Chromosome:chromosome 1
Location:1766642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009765 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCGCCAACCGTGTGCTAACCAACGCCAACCCAACTTCCCTCATACAT
Internal bar code:GGAATTTTGTCGATTAATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGTGCACTAGGAGGCAT
Suggested primer 2:TGTCAGTGCAAGAGTCGGTC