Insertion junction: CLIP2.006969_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006969
Chromosome:chromosome 3
Location:3418557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166750 PTK3 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Putative tyrosine kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTGGGCTACTAGGGTCGCCAGTCGCCACTGTGGGGTGGGAAGGGAT
Internal bar code:CTTATTATGGCTCTGTTTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTCCGTACTACTAGTGC
Suggested primer 2:TGTCATACGCCATCGAGCTC