Insertion junction: CLIP2.006972_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006972
Chromosome:chromosome 6
Location:3638768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278141 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTGCGAAAGGCGCAGCAGCCGGCTGCGGCTGCGGCTGTTGCGGCCG
Internal bar code:GTTGGGAGTAAAGTTGGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2510
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCCTGAAAATTGCCGTTT
Suggested primer 2:CTCGTCGGCTATGTCAGGTC