Insertion junction: CLIP2.006973_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006973
Chromosome:chromosome 16
Location:6445085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTTGGTGCCTCTGTGCCGCGTGCCCAGCAGCAGTGCCGGCGGCGGTG
Internal bar code:AAGTTAAGTTAGTCAGTCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4598
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCTAAATCGCACCTGC
Suggested primer 2:GCGGCCTTCCTTACCTTCTT