Insertion junction: CLIP2.006980_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006980
Chromosome:chromosome 11
Location:844162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467644 HSP101,CLPB1 (1 of 3) K03695 - ATP-dependent Clp protease ATP-binding subunit ClpB (clpB); ClpB chaperone, Hsp100 family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCAATAATGTGCTTGGAGAGGCGATTAACCTAGCCAAGGAGGACAAGC
Internal bar code:TTAATCACACTGGTTATCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1049
LEAP-Seq percent confirming:98.5714
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCACCGGGTTGTTCTT
Suggested primer 2:ATGATTGCGCTGGAAGGACA