Insertion junction: CLIP2.006982_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006982
Chromosome:chromosome 1
Location:5208034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036350 PMA1 (1 of 5) K01537 - Ca2+-transporting ATPase (E3.6.3.8); Related to plasma membrane P-type and chloroplast type calcium ATPases CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATGCCGCGGCGCAGGTCGTCAAGCAGCGGGCGTGGGACCTCAGCGG
Internal bar code:GGCTAAAGGGTCGCGGTTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGTTGTGAAGACTAGCC
Suggested primer 2:CACGTCTTCAAGTCCGAGCT