Insertion junction: CLIP2.006994_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006994
Chromosome:chromosome 9
Location:6550630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416050 AGS1 Argininosuccinate synthase; (1 of 1) 6.3.4.5 - Argininosuccinate synthase / Citrulline--aspartate ligase 3'UTR
Cre09.g416100 DNJ11 (1 of 1) K09518 - DnaJ homolog subfamily B member 12 (DNAJB12); DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAGGTGATGCCTGTGTGGGCCGCCGTGCCACTCGGGTTGATGGGCA
Internal bar code:CTGAGGTAACGTTGGTGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3079
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACAAGGGCCTGTACAA
Suggested primer 2:GCTTCGAAGATCGCAAGCTG