Insertion junction: CLIP2.006995_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006995
Chromosome:chromosome 9
Location:2585110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGCCTCGCGGTTCCGCCCATAGGAATAGTCGGTTCCGCGACATGTAT
Internal bar code:CTTTGGGCCAGTATATGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGGCCCACCATTGATT
Suggested primer 2:GAGGTGCTTGCTGAACTTGC