Insertion junction: CLIP2.006996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006996
Chromosome:chromosome 5
Location:113666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242178 (1 of 1) PTHR23344//PTHR23344:SF10 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACAACACCCGGGACAGGACGTGACACGTATTTCGCCTGTTCCTAGC
Internal bar code:CGTAGGAGTGTGAGTAACTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1142
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCTGCATCGCATACAC
Suggested primer 2:ACAGACTGCCTGCTGTTACC