Insertion junction: CLIP2.006998_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006998
Chromosome:chromosome 17
Location:3195260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721250 QilinDyf-3,FAP22,IFT38,Cluap1 (1 of 1) PF10234 - Clusterin-associated protein-1 (Cluap1); Intraflagellar Transport Protein 38 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGAACACCGACGATTCGCAGACGCTCAGAGGTGGCCCGCGGCACTCC
Internal bar code:TGCATAAGGTCTTAACGCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGCTGATATCATCCGC
Suggested primer 2:CAGCGACTCAAGAACCTGGT