Insertion junction: CLIP2.007009_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007009
Chromosome:chromosome 5
Location:909440
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g246551 (1 of 1) IPR000104//IPR001810//IPR020683 - Antifreeze protein, type I // F-box domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGGGCCGCGAGCAGTGCGAAGTCAGAGTTGGCGCCGGCGGCCAGGTA
Internal bar code:GATTAAGGACATAATATCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:86
LEAP-Seq percent confirming:10.3448
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATCCCAACCTCCACAC
Suggested primer 2:CTCGGACACAGAACCCAGAC