Insertion junction: CLIP2.007011_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007011
Chromosome:chromosome 6
Location:1941006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGCGAGTATTAGGACGAGCACCGAGGGGTATCTGATGTGGCTTATG
Internal bar code:GGTCGGCGGACGCTTGGCTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCATTGCCCTGTATCCA
Suggested primer 2:AAGGAAGCTGACGTGGAGTG