Insertion junction: CLIP2.007013_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007013
Chromosome:chromosome 12
Location:6203937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535900 ARL1 ARF-like GTPase; (1 of 1) K07942 - ADP-ribosylation factor-like protein 1 (ARL1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGTTTGGTCGCGTCCGCTGGCTGCGTGCCAGACACTGACGTGACGCC
Internal bar code:TAAATTGAGTATACAGCTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1815
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTGGTACCAGAGAAAC
Suggested primer 2:GTGGTAAGGAAAGTGGGCGA