Insertion junction: CLIP2.007016_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007016
Chromosome:chromosome 1
Location:2626754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACGCAAACGCATGTGCCCCTGTTAATCCCTCGGACCGCCTGACTGA
Internal bar code:TCTGTCGTTAGAAGGACAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2908
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATGGCGTCGGTGAAGG
Suggested primer 2:TCCTCAAGTGCCTCAACGAC