Insertion junction: CLIP2.007033_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007033
Chromosome:chromosome 6
Location:5127450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283000 CGLD39 Conserved in the Green Lineage and Diatoms CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCCTCCACAAGGTCCGGGCCGGGGCCTGGGGGGGTGCGGGTGGGGG
Internal bar code:CTTATTTGATTTCAGCGGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGTGTTTGGAAGGGTG
Suggested primer 2:ACTGGTTGGGTGACGTCATG