Insertion junction: CLIP2.007033_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007033
Chromosome:chromosome 6
Location:5127450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283000 CGLD39 Conserved in the Green Lineage and Diatoms CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTCGGCTGCTGGGCGGCAGCAGGGCCCTGCGCTCGCAGCTGCACAA
Internal bar code:CTTATTTGATTTCAGCGGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2309
LEAP-Seq percent confirming:37.931
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTTGGGTGACGTCATG
Suggested primer 2:ACTGGGTGTTTGGAAGGGTG