Insertion junction: CLIP2.007038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007038
Chromosome:chromosome 9
Location:2041021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396550 5'UTR
Cre09.g396600 HYD2,HYDA2 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCAGCAATGGCAACGCGGACGGCCGGGGCCACTTGCGCGATCAAGAC
Internal bar code:GATTTATCTGAGCAAGTGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2137
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACTATTCGTCGCAGGCACAA
Suggested primer 2:CACATCCAGCTCGGTTCACT