Insertion junction: CLIP2.007039_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007039
Chromosome:chromosome 17
Location:3686186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAGCGCTGCACCCACTCGAACAGGGTGGAGGCGGTGCGGCACACGG
Internal bar code:AAGATTAGGCACTCCTGGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTTGAGCTGAGTCCACG
Suggested primer 2:TGGGTAAGGAAGGCGAACAC