Insertion junction: CLIP2.007039_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007039
Chromosome:chromosome 17
Location:3686205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCGCCAAGACCGAGTCGGGCGCAGTCGATGCAGCTGCCTTCGCCGCC
Internal bar code:ACGGTTGGCGCAGTCGGGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4614
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTAAGGAAGGCGAACAC
Suggested primer 2:ACCTTTGAGCTGAGTCCACG