Insertion junction: CLIP2.007057_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007057
Chromosome:chromosome 1
Location:2595699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015350 POR1,POR Light-dependent protochlorophyllide reductase; (1 of 1) K00218 - protochlorophyllide reductase (E1.3.1.33, por) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGAGCACCCGCTACACTGCACACGAGTTTTGCCAGATGCTAGGCGCT
Internal bar code:GGGATGAGAATTCATTGCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3354
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCTCTGCCAAGCTGGT
Suggested primer 2:GCGTCTTGTGGTGTTGGTTC