Insertion junction: CLIP2.007063_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007063
Chromosome:chromosome 10
Location:5629755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458700 (1 of 6) PF07719//PF13414 - Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCTCTGCTGCTGCCAGCGCTGCTGCTGCTGCCGCCGCCGCTGTCCCG
Internal bar code:ATTAACAGGATTAAATTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:114
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTTTGGGGCAGTGTTCA
Suggested primer 2:ACGTCTTCTTTCGTCAGCGT