Insertion junction: CLIP2.007076_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007076
Chromosome:chromosome 1
Location:2644943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015950 CPL11 (1 of 1) PTHR17490//PTHR17490:SF7 - SUA5 // SUBFAMILY NOT NAMED; translation factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAGTTCCGGAGCGTTATCGACACGCCACAGCCTGCCACGTCAGCTCT
Internal bar code:ACCCGGGGGGTATTTGACATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1339
LEAP-Seq percent confirming:90.6977
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTAGGTGGTGATGGTGG
Suggested primer 2:GACACGCGGAGAGATGGTAG