Insertion junction: CLIP2.007098_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007098
Chromosome:chromosome 1
Location:2610135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015550 DDA1 (1 of 1) 4.1.2.52 - 4-hydroxy-2-oxoheptanedioate aldolase / HKHD aldolase; 2-dehydro-3-deoxyglucarate aldolase 3'UTR
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGATCCAGCAATCAAACGCAGGCATGATATCGGTGGGCGATGCCGCG
Internal bar code:CATTCAATAAACGACGAGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACACGGACCTCGGAATG
Suggested primer 2:TTTGCTCAATATGCTGCGGC