Insertion junction: CLIP2.007105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007105
Chromosome:chromosome 12
Location:2281111
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508300 CGL144 Conserved in the Green Lineage; (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACGCGCCGATCACACGCTCACAGGTGGAACTTGAGCCGGGGGTCCT
Internal bar code:TGTAGGGTTTTTGAGTTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2063
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACGCATGATTGGTGTAG
Suggested primer 2:GCATCGCGCTTCACAGTAAG