Insertion junction: CLIP2.007105_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007105
Chromosome:chromosome 12
Location:2281114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508300 CGL144 Conserved in the Green Lineage; (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGAGCCATGGAGGTGGCGGCGCTGGTCGGACAGGGTGGGGGGAATCA
Internal bar code:GGGTGTTACTGTCTGCGCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCGCGCTTCACAGTAAG
Suggested primer 2:CGCACGCATGATTGGTGTAG