Insertion junction: CLIP2.007105_5

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007105
Chromosome:chromosome 13
Location:1347429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571450 (1 of 2) K17278 - membrane-associated progesterone receptor component (PGRMC1_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCGCACGCCCGGCCCGGGTCTCAGCACGACACCACATGACCCAAC
Internal bar code:AAGCGCGGTAGAGCAGGCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2648
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCGGTTCATTTTGGTTT
Suggested primer 2:GAAGCCCGACTCTGGAAACA