Insertion junction: CLIP2.007108_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007108
Chromosome:chromosome 1
Location:6909653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049600 CGLD22 (1 of 1) K02116 - ATP synthase protein I (atpI); Assembly factor for chloroplast ATPase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGGGGCGAAGGTGGTGGTGGAGGGCCTGGCCTCACTAGGAGCAGCA
Internal bar code:TCCGGTAACGACCGTAGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAGCGTCTACCTCATCT
Suggested primer 2:AGTGTCGAGGGATACGGTGA