Insertion junction: CLIP2.007116_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007116
Chromosome:chromosome 3
Location:8796709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206929 RSE4,EGY1 (1 of 1) PTHR31412:SF0 - ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED; membrane associated metalloprotease involved in chloroplast development intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTACCAGCTGACCAGCTAGCCATATCTGTGCCCAAGCGCTATAGCT
Internal bar code:GCTTTCAGGTGGTGGGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2981
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTTTGAGACGCTGCTC
Suggested primer 2:GCTCTGTTGAAAAGCGTGCA