Insertion junction: CLIP2.007120_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007120
Chromosome:chromosome 3
Location:6293914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191950 CGLD31 (1 of 1) PF01782 - RimM N-terminal domain (RimM); RimM-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGATCCTGGTGGAAACGCCTAGCTGGCGCACACCCGACGATGGGGT
Internal bar code:CGGACTTTAGATATTGTCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGCTCATACTCCTCG
Suggested primer 2:TCGAACGCTGTGACATGACA