Insertion junction: CLIP2.007124_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007124
Chromosome:chromosome 8
Location:580641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359900 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAAGGTCGGGTTAACGGCACACCTGTCGCGCATCGGCCCTAACCCGG
Internal bar code:AGTTGCGTCCGATTTAGTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2262
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCAGCTTGGACTTCAGG
Suggested primer 2:AAGCAGTGCAGCGAAACTTG