Insertion junction: CLIP2.007132_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007132
Chromosome:chromosome 1
Location:2763288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016750 PSBS2 (1 of 2) K03542 - photosystem II 22kDa protein (psbS); chloroplast Photosystem II-associated 22 kDa protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAACACAAGTATCCCACACACGCATACGCCAGTTGTCAAGCCAGCG
Internal bar code:TTTACGGAATTCGTCGACCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3066
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGACCGATTTTGCGTGCG
Suggested primer 2:AATCAAGGGGCGTGGCATAA