Insertion junction: CLIP2.007136_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.007136
Chromosome:chromosome 14
Location:1489069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617600 DEG9 Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACCCAACGTGACGCTTCGCCCCTACCAACAGCCCCAGCCCCTCAGGG
Internal bar code:TTGCTGACGGCCGCAGACTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3985
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACATCATCCCCTACCGC
Suggested primer 2:CTCCAAACACGCTAGGGGTT