Insertion junction: CLIP2.007149_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007149
Chromosome:chromosome 3
Location:3414112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166750 PTK3 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Putative tyrosine kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGCGAGCATGTGTGCACCTGAACGCTTTGTCGCATACTTTGTGCAGA
Internal bar code:TGATGCACAGAATGGTCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1220
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGAGGAGTTGCTTGAGG
Suggested primer 2:GAGGATGCGCATACCGAAGA